• COVID forecasting method using hospital

    From ScienceDaily@1:317/3 to All on Wed Feb 2 21:30:40 2022
    COVID forecasting method using hospital and cellphone data proves it can reliably guide US cities through pandemic threats

    Date:
    February 2, 2022
    Source:
    University of Texas at Austin
    Summary:
    Using cellphone mobility data and COVID-19 hospital admissions data,
    researchers have reliably forecast regional hospital demands for
    almost two years, according to a new study. The forecasting system,
    which municipal authorities credit with helping Austin maintain
    the lowest COVID-19 death rate among all large Texas cities, has
    been built out for use by 22 municipal areas in Texas and can be
    used by any city to guide COVID-19 responses as the virus continues
    to spread.



    FULL STORY ========================================================================== Using cellphone mobility data and COVID-19 hospital admissions data, researchers at The University of Texas at Austin have reliably forecast regional hospital demands for almost two years, according to a new study published in the Proceedings of the National Academy of Sciences. The forecasting system, which municipal authorities credit with helping Austin maintain the lowest COVID-19 death rate among all large Texas cities,
    has been built out for use by 22 municipal areas in Texas and can be used
    by any city to guide COVID-19 responses as the virus continues to spread.


    ==========================================================================
    The scientific team -- collaborating with Austin city elected leaders,
    public health officials and health care system executives -- developed a powerful forecasting model and two public-facing dashboards that allowed
    city leaders to manage health care resources, ensure sufficient hospital capacity and communicate pandemic risks to the public.

    When the model was developed in the first months of the pandemic, it
    stood out among other forecasts that were available online. For example,
    the UT model incorporated detailed public movement data and hospital
    admissions data long before the well-known Institute for Health Metrics
    and Evaluation (IHME) model by the University of Washington. The model
    also provides city-level rather than state-level forecasts that are vital
    for anticipating and managing COVID-19 health care surges. To do so,
    it incorporates detailed information about the ages and health risks of
    local residents.

    The forecasting dashboards developed by the UT COVID-19 Modeling
    Consortium use intuitive graphics and spaghetti lines from hurricane forecasting to communicate the immediate and future risks of COVID-19. The daily online forecasts have been helping Austin residents and local
    officials make life- saving decisions since the spring of 2020. The model
    can be adapted to project COVID-19 health care needs in any U.S. city
    three weeks in advance. It uses anonymized cellphone mobility data from SafeGraph, which indicates how much time people stay at home and how
    frequently they visit points of interest such as bars, restaurants and
    schools. These data reflect how behaviors change daily in response to
    changing COVID-19 conditions.

    "Community movement data helps us gauge changing COVID-19 transmission
    risks and anticipate health care surges several weeks in advance,"
    said Spencer Fox, corresponding author and associate director of the UT COVID-19 Modeling Consortium.

    The team also measured the relationship between mobility and COVID-19 transmission and found that precautionary measures, such as face masks
    and social distancing, reduced the risks of transmission when people
    were out in public.



    ==========================================================================
    "The relationship between mobility and COVID-19 transmission was weaker
    in February 2021 compared to March 2020, suggesting that the community
    found safer ways to interact in public," said Fox.

    The researchers found a strong correlation between COVID-19 policies
    and pandemic trends. When behaviors relaxed, the virus picked up
    speed. When restrictions were enacted to curb surges, they had the desired effect. For example, Texas' rapid reopening policy in the spring of 2020 corresponded with a major COVID-19 surge in Austin, which subsided after
    the implementation of local restrictions and a statewide mask mandate.

    "This forecasting system helped save lives by allowing our community to
    see what they needed to do and when they needed to do it," said Austin
    Mayor Steve Adler. "This tool stands at the intersection of science
    and public policy and shows the good that can be realized when they are aligned. It was an honor to be part of such a stellar team that developed
    and applied this system," said Adler.

    The forecasting system was developed by a municipal COVID-19 task force in Austin that included scientists, civic leaders, public health officials
    and health care executives. The model projections have informed policy decisions and response actions throughout the pandemic, including resource planning by local hospitals, requests for additional resources from state
    and federal agencies, the launch and dismantling of alternative care
    sites to provide additional health care capacity, and changes in the Austin-area COVID-19 alert stage to communicate and manage risks. The
    model projections have been frequently discussed in public forums and highlighted by news media.

    Data-driven policies and effective health messaging have helped Austin
    to keep its COVID-19 death rate the lowest among all large Texas cities.

    "Our forecasts have helped the city of Austin make key decisions and communicate risks throughout the COVID-19 pandemic. The city leadership
    put their trust in science, and the local health care systems worked
    tirelessly to provide critical data," said Lauren Ancel Meyers, director
    of the consortium, a co-author of the study and a professor of integrative biology and statistics and data sciences at UT Austin. "Together, we were
    able to build a forecasting system that is easy to interpret and can be
    used by any city to guide COVID-19 responses as the virus continues to
    spread in cities throughout the U.S.," said Meyers.

    Co-first authors are Spencer J. Fox of The University of Texas at Austin
    and Michael Lachmann of Santa Fe Institute. Other authors are Mauricio
    Tec, Re'my Pasco, Spencer Woody, Tanvi Ingle, Emily Javan, S. Claiborne Johnston, James Scott and Xutong Wang of The University of Texas at
    Austin; Maytal Dahan and Kelly Gaither of UT Austin's Texas Advanced
    Computing Center; Zhanwei Du, previously of Meyers' lab; The University
    of Hong Kong; Mark E. Escott of UT Dell Medical School and the City of
    Austin; and Steve Adler of the City of Austin. Meyers holds the Cooley Centennial Professorship of Integrative Biology and Statistics and Data Sciences at The University of Texas at Austin.

    The research was supported by the Centers for Disease Control and
    Prevention, the National Institutes of Health, and a donation from Tito's Handmade Vodka.

    The Texas Advanced Computing Center at The University of Texas at Austin provided high-performance computing, visualization, database and grid
    resources that have contributed to the research results reported.

    special promotion Explore the latest scientific research on sleep and
    dreams in this free online course from New Scientist -- Sign_up_now_>>> ========================================================================== Story Source: Materials provided by University_of_Texas_at_Austin. Note: Content may be edited for style and length.


    ========================================================================== Journal Reference:
    1. Spencer J. Fox, Michael Lachmann, Mauricio Tec, Remy Pasco, Spencer
    Woody, Zhanwei Du, Xutong Wang, Tanvi A. Ingle, Emily Javan, Maytal
    Dahan, Kelly Gaither, Mark E. Escott, Stephen I. Adler, S. Claiborne
    Johnston, James G. Scott, Lauren Ancel Meyers. Real-time
    pandemic surveillance using hospital admissions and mobility
    data. Proceedings of the National Academy of Sciences, 2022; 119
    (7): e2111870119 DOI: 10.1073/pnas.2111870119 ==========================================================================

    Link to news story: https://www.sciencedaily.com/releases/2022/02/220202111742.htm

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